The detailed information of tRNA gene sequence


Sequence ID>WENV170337424
Genome IDCETA01111956
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 10430
End posion on genome 10341
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtgtttttat
tRNA gene sequence 
ACTCCAGACGACGATGCTGGTTTTCGTCACTAGACTTTCAATCTAGCGTCCGCTTTAGGA
CCGAGGGTTCAATTCCCTTCTGGAGTACCA
Downstream region at tRNA end position 
atttaattat
Secondary structure (Cloverleaf model)
>WENV170337424	Glu	TTC
                   t      ACCA atttaattat
                     A - T
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    A     T T C C C     A
    C G T A        C      + | | | |     A
  T         G C A G       G A G G G     C
  G         | | | |                 T T
  G         C G T C
    T T T T        A     CGTCCGCTTTAGGACC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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