The detailed information of tRNA gene sequence


Sequence ID>WENV170337436
Genome IDCETA01112485
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 259
End posion on genome 175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttaaacatt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTAATGCAGCAGCCTGCTAAGCTGTCATCCTTCGGGATGCCCG
GGTTCGAATCCCGGTCTCTCCGCTA
Downstream region at tRNA end position 
gatttttagt
Secondary structure (Cloverleaf model)
>WENV170337436	Ser	GCT
                   t      GCTA gatttttagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G A C G       C C G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CATCCTTCGGGATGC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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