The detailed information of tRNA gene sequence


Sequence ID>WENV170337516
Genome IDCETA01127428
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 537
End posion on genome 441
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgaccttgga
tRNA gene sequence 
GGAAGCGAATAGGGTCTGGTGGCCCTCTCGGACTTCAAATCCGACGGGCGTCGTCGAAAG
GCGGCGTTGCTGGGTTCGATTCCCAGGCGCTTCCGCCt
Downstream region at tRNA end position 
tttctcgtaa
Secondary structure (Cloverleaf model)
>WENV170337516	SeC(p)	TCA
                   a      GCCt tttctcgtaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T T
                    A     G A C C C     A
      T C T        T      | | | | |     G
    G       G G G A       C T G G G     C
    G       | | | |                 T T
    T       C C C T
      G G          C     CGGGCGTCGTCGAAAGGCGGCGTTG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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