The detailed information of tRNA gene sequence


Sequence ID>WENV170337763
Genome IDCETA01153053
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 85306
End posion on genome 85392
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcaatttaa
tRNA gene sequence 
GGAAAGTTGGCAGAGCGGTCTATTGCACTCGACTGCTAATCGAGAGTCCTTCGGGGCACG
TGGGTTCGAATCCCACACTTTCCGCCA
Downstream region at tRNA end position 
attcggaagg
Secondary structure (Cloverleaf model)
>WENV170337763	Ser	GCT
                   a      GCCA attcggaagg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C T A        A     AGTCCTTCGGGGCAC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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