The detailed information of tRNA gene sequence


Sequence ID>WENV170337963
Genome IDCETA01229099
Search identical group
Phylum/Class[CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 336
End posion on genome 262
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tggaaaaatc
tRNA gene sequence 
GGTCTGTTAGTATATCGGTAAGTATGCCACCCTGTCACGGTGGAGAGAAGGGTTCGATTC
CCTTACAGACCGCCA
Downstream region at tRNA end position 
actcgggcct
Secondary structure (Cloverleaf model)
>WENV170337963	Asp	GTC
                   c      GCCA actcgggcct
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     T T C C C     A
      C T A        A      | | | | |     G
    G       T A T G       A A G G G     C
    G       + | | +                 T T
    T       G T A T
      A A          G     AGAG
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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