The detailed information of tRNA gene sequence


Sequence ID>WENV170338496
Genome IDCETB01036509
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 112
End posion on genome 201
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaaaaatca
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTTAATGGGCACGCCTGGAAAGCGTGTGTGGGTGCAAGCTCA
CCGCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
tttattttaa
Secondary structure (Cloverleaf model)
>WENV170338496	Ser	GGA
                   a      GCCA tttattttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G A C C       G C A G G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TGTGGGTGCAAGCTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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