The detailed information of tRNA gene sequence


Sequence ID>WENV170339347
Genome IDCETB01117809
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 375
End posion on genome 466
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgccgctta
tRNA gene sequence 
GGAGAGGTGACAGAGTCTGGTCGAATGTGCTTCCCTGCTAAGGAAGTGACTGCTCACGCG
GTCCGTGGGTTCAAATCCCACCCTCTCCGCAA
Downstream region at tRNA end position 
caactgaatc
Secondary structure (Cloverleaf model)
>WENV170339347	Ser	GCT
                   a      GCAA caactgaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  T         G A C A       G T G G G     C
  G           | | |                 T T
  G         A T G T
    T C G A        G     TGACTGCTCACGCGGTCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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