The detailed information of tRNA gene sequence


Sequence ID>WENV170339509
Genome IDCETB01135207
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 577
End posion on genome 668
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcaagaattc
tRNA gene sequence 
GGATAGTTGGCAGAGTCTGGTTGAATGCACTGGTCTTGAAAACCAGCAACGGGTTAAACC
GTTCGGGGGTTCGAATCCCTCACTATCCGCCA
Downstream region at tRNA end position 
gtttaaaaag
Secondary structure (Cloverleaf model)
>WENV170339509	Ser	TGA
                   c      GCCA gtttaaaaag
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     CAACGGGTTAAACCGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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