The detailed information of tRNA gene sequence


Sequence ID>WENV170340221
Genome IDCETB01284497
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 164
End posion on genome 234
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctccataaaa
tRNA gene sequence 
GGATTAATAGCATAATGGTAGTGCCACTGTCTTCAAAACAGTTTGTAGGGGTTCGATTCC
CTTTTAATCTGtat
Downstream region at tRNA end position 
gaaaggaata
Secondary structure (Cloverleaf model)
>WENV170340221	SeC	TCA
                   a      Gtat gaaaggaata
                     G + T
                     G - C
                     A - T
                     T - A
                     T - A
                     A - T
                     A - T          T T
                    T     T T C C C     A
        A A        A      | + | | |     G
      T     T A C G       A G G G G     C
      G     + | | |                 T T
      G     G T G C
        T A        C     TTGT
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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