The detailed information of tRNA gene sequence


Sequence ID>WENV170340377
Genome IDCETB01341819
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1244
End posion on genome 1169
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGGCCTTTAGTTCAGTGGTTAGAGCACCCCGCTCATAACGGGATAGTCCTCGGTTCGAAT
CCGAGAGGGCCCACCA
Downstream region at tRNA end position 
ttaaaggaaa
Secondary structure (Cloverleaf model)
>WENV170340377	Met	CAT
                   t      ACCA ttaaaggaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          T A
                    T     G A G C C     A
      T G A        A      | | | | |     G
    G       C T T G       C T C G G     C
    G       | | + |                 T T
    T       G A G C
      T A          A     TAGTC
                    C   A
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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