The detailed information of tRNA gene sequence


Sequence ID>WENV170340392
Genome IDCETB01345460
Search identical group
Phylum/Class[CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1140
End posion on genome 1066
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctccatttat
tRNA gene sequence 
AGGTCATTAGTGTTAGAGGTAGCACGTTGGACTCCAAATCCAAAAGCAGGGGTTCGATTC
CTCTATGGCCTGCCA
Downstream region at tRNA end position 
gaaaatctct
Secondary structure (Cloverleaf model)
>WENV170340392	Trp	CCA
                   t      GCCA gaaaatctct
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     T - A          T T
                    T     T C T C C     A
      G A T        A      | | + | |     G
    A       T G T G       A G G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AAGC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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