The detailed information of tRNA gene sequence


Sequence ID>WENV170340871
Genome IDCETC01043414
Search identical group
Phylum/Class[CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 802
End posion on genome 727
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcgctttg
tRNA gene sequence 
GGGAGTGTAGCTCAATGGTTAGAGCAAACGACTCATAATCGTTAGGTTGTGGGTTCGAAT
CCCGCCGCTCCCACCA
Downstream region at tRNA end position 
taactcattg
Secondary structure (Cloverleaf model)
>WENV170340871	Met	CAT
                   g      ACCA taactcattg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C G C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTT
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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