The detailed information of tRNA gene sequence


Sequence ID>WENV170341198
Genome IDCETC01103600
Search identical group
Phylum/Class[CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 346
End posion on genome 253
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgacaaaaaa
tRNA gene sequence 
GGTGAGGTGGGTGAGCTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTACGTTATAATGA
CGTACCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tcaatataag
Secondary structure (Cloverleaf model)
>WENV170341198	Ser	GCT
                   a      GCCA tcaatataag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGTTATAATGACGTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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