The detailed information of tRNA gene sequence


Sequence ID>WENV170341441
Genome IDCETD01008619
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5486
End posion on genome 5561
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttagttaga
tRNA gene sequence 
GGAATTGTAGCTTAGTATGGTTAGAGCACTCGGCTCATAACCGAGCGGTCGTCGGTTCAA
ATCCGACCAATTCCACag
Downstream region at tRNA end position 
atgggaaaga
Secondary structure (Cloverleaf model)
>WENV170341441	Met	CAT
                   a      ACag atgggaaaga
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     T - A
                     G - C          T A
                    T     C A G C C     A
    A T G A        A      | | | | |     A
  T         T T C G       G T C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          A     CGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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