The detailed information of tRNA gene sequence


Sequence ID>WENV170342429
Genome IDCETD01122406
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 179
End posion on genome 274
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtttctagt
tRNA gene sequence 
GGAGGTGTCCGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGATAGGTGATCC
CTGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
aatctgaaaa
Secondary structure (Cloverleaf model)
>WENV170342429	SeC	TCA
                   t      GCCA aatctgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGATAGGTGATCCCTGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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