The detailed information of tRNA gene sequence


Sequence ID>WENV170342484
Genome IDCETD01130977
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 233
End posion on genome 306
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atcatcatag
tRNA gene sequence 
GGGCTTGTAGCTCAATCTGGTAGAGCGCCCGCTTTGCAAGCGGGAGGTTAGGTGTTCAAA
TCACTTCAAGTCCAtct
Downstream region at tRNA end position 
caatcgagaa
Secondary structure (Cloverleaf model)
>WENV170342484	Ala	TGC
                   g      Atct caatcgagaa
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T T C A C     A
      T A A        A      | + | | |     A
    C       C T C G       A G G T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTT
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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