The detailed information of tRNA gene sequence


Sequence ID>WENV170342697
Genome IDCETD01169022
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 573
End posion on genome 489
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccggtgatC
tRNA gene sequence 
GGCATCATGGCCGAGTGGTTAAGGCGCCAGACTCGAAATCTGGTGGGCTCTGCCCGCGTC
GGTTCGAATCCGGCTGATGTCGTCt
Downstream region at tRNA end position 
ccagtatatt
Secondary structure (Cloverleaf model)
>WENV170342697	Ser	CGA
                   C      GTCt ccagtatatt
                     G - C
                     G + T
                     C - G
                     A - T
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | + | | |     G
    G       G C C G       G T C G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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