The detailed information of tRNA gene sequence


Sequence ID>WENV170342935
Genome IDCETD01189456
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1142
End posion on genome 1216
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaaaaaaat
tRNA gene sequence 
AGGCGTATAGTGTTAACGGTAGCACCACTGATTCCAAACCAGTTAGTGTGGGTTCGAATC
CTACTACGTCTGCCA
Downstream region at tRNA end position 
tcggagagta
Secondary structure (Cloverleaf model)
>WENV170342935	Trp	CCA
                   t      GCCA tcggagagta
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     C A T C C     A
      A A T        A      | | + | |     G
    C       T G T G       G T G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          C     TAGT
                    A - T
                    C - G
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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