The detailed information of tRNA gene sequence


Sequence ID>WENV170343096
Genome IDCETD01289469
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 426
End posion on genome 517
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcctccaac
tRNA gene sequence 
GGAGAGGTGGCTGAGTCCGGTTTAAGGCACACGACTCGAAATCGTGCGTAGGGTTAAACC
TACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tctgggccca
Secondary structure (Cloverleaf model)
>WENV170343096	Ser	CGA
                   c      GCCA tctgggccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        A     CGTAGGGTTAAACCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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