The detailed information of tRNA gene sequence


Sequence ID>WENV170343246
Genome IDCETD01358219
Search identical group
Phylum/Class[CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1167
End posion on genome 1095
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tataatagag
tRNA gene sequence 
GGGCTTATAGTTTAGTGGTTAAAACACGCTGCTCATAACGGCTGTAACGTAGGTTCGAAT
CCTGCTAGGCCTAact
Downstream region at tRNA end position 
tagattaata
Secondary structure (Cloverleaf model)
>WENV170343246	Met	CAT
                   g      Aact tagattaata
                     G + T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     A - T          T A
                    T     C G T C C     A
      T G A        A      | + | | |     G
    G       T T T G       G T A G G     C
    G       | | | |                 T T
    T       A A A C
      T A          A     GTAAC
                    C   T
                    G - C
                    C - G
                    T + G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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