The detailed information of tRNA gene sequence


Sequence ID>WENV170344435
Genome IDCETE01104166
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1116
End posion on genome 1024
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccttcactca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCTGGTTTGCTAAACCGGTGAAGGGCTAATCGTC
CTTCCACGGGTTCGAATCCCGTTCTCTCCGCCA
Downstream region at tRNA end position 
tttgttttcg
Secondary structure (Cloverleaf model)
>WENV170344435	Ser	GCT
                   a      GCCA tttgttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A C G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAAGGGCTAATCGTCCTTCC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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