The detailed information of tRNA gene sequence


Sequence ID>WENV170344529
Genome IDCETE01112817
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 201
End posion on genome 296
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taaagatagt
tRNA gene sequence 
GGAAGAGGATCGCACCCTGGTGGGGCGCCTAGACTTCAAATCTAGTGAGAGGCGTACTAC
GTCTCTGGTGGGTTCGACTCCCACGCTCTTTCGCCA
Downstream region at tRNA end position 
gaaattttta
Secondary structure (Cloverleaf model)
>WENV170344529	SeC	TCA
                   t      GCCA gaaattttta
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    T       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     TGAGAGGCGTACTACGTCTCTG
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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