The detailed information of tRNA gene sequence


Sequence ID>WENV170344825
Genome IDCETE01142122
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1525
End posion on genome 1602
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgttttgtc
tRNA gene sequence 
CGGGACGTAGCGTAGTCTGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGCCGTGAGTTCGA
ATCTCACCGTCCCGACCA
Downstream region at tRNA end position 
ttttcacttc
Secondary structure (Cloverleaf model)
>WENV170344825	Pro	TGG
                   c      ACCA ttttcacttc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C T C     A
    C T G A        A      | | | | |     G
  T         T G C G       G T G A G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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