The detailed information of tRNA gene sequence


Sequence ID>WENV170345198
Genome IDCETE01226196
Search identical group
Phylum/Class[CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 613
End posion on genome 687
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaataattaa
tRNA gene sequence 
GGGGTGGTAGTTCAATTGGTTAGAGCACCTGCCTGTCACGCAGGAAGTTGCGGGTTCGAG
TCCCGTTCATCCCGCtc
Downstream region at tRNA end position 
aaaagcctct
Secondary structure (Cloverleaf model)
>WENV170345198	Asp	GTC
                   a      GCtc aaaagcctct
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C
                     G + T          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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