The detailed information of tRNA gene sequence


Sequence ID>WENV170345525
Genome IDCETF01024720
Search identical group
Phylum/Class[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1778
End posion on genome 1703
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacttcttct
tRNA gene sequence 
GGGCTCGTAGCTCAATGGTCAGAGCAGTCGGCTCATAACCGATTGGTTGCAGGTTCGAAT
CCTGCCGAGCCTACCA
Downstream region at tRNA end position 
aactttttta
Secondary structure (Cloverleaf model)
>WENV170345525	Met	CAT
                   t      ACCA aactttttta
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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