The detailed information of tRNA gene sequence


Sequence ID>WENV170345801
Genome IDCETF01073475
Search identical group
Phylum/Class[CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 161
End posion on genome 236
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcgattatc
tRNA gene sequence 
GAGATGGTGCCGGAGTGGTTAACGGGTTAGTTTGCAAAACTAAATTTCGTGAGTTCGAAT
CTCACCCATCTCTCTA
Downstream region at tRNA end position 
tgagaaaaca
Secondary structure (Cloverleaf model)
>WENV170345801	Cys	GCA
                   c      TCTA tgagaaaaca
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G A G     C
    G         | | |                 T T
    T       A C G G
      T A          G     ATTTC
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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