The detailed information of tRNA gene sequence


Sequence ID>WENV170350489
Genome IDCETH01084787
Search identical group
Phylum/Class[CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 525
End posion on genome 616
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagttaataa
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTCGAAGGCGCGCGCCTGGAAAGTGCGTATACGGAGCAATTCG
TATCGAGGGTTCGAATCCCTTCCTCTCTGCTA
Downstream region at tRNA end position 
accctatttt
Secondary structure (Cloverleaf model)
>WENV170350489	Ser	GGA
                   a      GCTA accctatttt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGAGCAATTCGTATC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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