The detailed information of tRNA gene sequence


Sequence ID>WENV170356029
Genome IDCETI01506191
Search identical group
Phylum/Class[CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 7259
End posion on genome 7168
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttaattat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTTAAGGCGACGGTTTGCTAAACCGTTGAAGATGTTAAAGTC
TTCCGCTGGTTCGAATCCAGTCCTCTCCGCCA
Downstream region at tRNA end position 
gccagagaat
Secondary structure (Cloverleaf model)
>WENV170356029	Ser	GCT
                   t      GCCA gccagagaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C T G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGAAGATGTTAAAGTCTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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