The detailed information of tRNA gene sequence


Sequence ID>WENV170357178
Genome IDCETJ01114931
Search identical group
Phylum/Class[CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 345
End posion on genome 434
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caactttatg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAGGCGCCGGTCTCGAAAACCGGTATATGTGTATTCATA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
taatttaaca
Secondary structure (Cloverleaf model)
>WENV170357178	Ser	CGA
                   g      GCCA taatttaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TATATGTGTATTCATATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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