The detailed information of tRNA gene sequence


Sequence ID>WENV170357302
Genome IDCETJ01155596
Search identical group
Phylum/Class[CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 354
End posion on genome 443
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcatgccatt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGCTACCTTGGAAAGGTAGTATACGGGTAACCGTA
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttgaattttt
Secondary structure (Cloverleaf model)
>WENV170357302	Ser	GGA
                   t      GCCA ttgaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TATACGGGTAACCGTATC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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