The detailed information of tRNA gene sequence


Sequence ID>WENV170357347
Genome IDCETJ01167871
Search identical group
Phylum/Class[CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 494
End posion on genome 573
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaatttcatT
tRNA gene sequence 
GGGGTAGTTGTCTAGTCAGGTCTAGGATGTTACCTTCGGGAGGTAAAGGTCGTGGGTTCA
AATCCCACTTACCCCATCA
Downstream region at tRNA end position 
cataatataa
Secondary structure (Cloverleaf model)
>WENV170357347	Pro	CGG
                   T      ATCA cataatataa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G + T          T A
                    T     C A C C C     A
    C T G A        T      | | | | |     A
  A         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T C T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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