The detailed information of tRNA gene sequence


Sequence ID>WENV170359301
Genome IDCETK01326448
Search identical group
Phylum/Class[CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 267
End posion on genome 340
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccataaaac
tRNA gene sequence 
GGGTAGTTGACCGAGTGGTGAGGTGGTGGATTGCAAATCCATATACGGGAGTTCGAATCT
CTCACTACCCTCAA
Downstream region at tRNA end position 
aaataattca
Secondary structure (Cloverleaf model)
>WENV170359301	Cys	GCA
                   c      TCAA aaataattca
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
        G A        G      | + | | |     G
      T     G C C A       G G G A G     C
      G       | | |                 T T
      G     A G G T
        T G        G     ATAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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