The detailed information of tRNA gene sequence


Sequence ID>WENV170359425
Genome IDCETK01371888
Search identical group
Phylum/Class[CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 279
End posion on genome 204
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tccctctggt
tRNA gene sequence 
GGGGTCGTAGCTCAGTTGGTAGAGCACCACAATGGCATTGTGGGGGTCGCTGGTTCGATC
CCAGTCGACTCCACCA
Downstream region at tRNA end position 
ttttttcttt
Secondary structure (Cloverleaf model)
>WENV170359425	Ala	GGC
                   t      ACCA ttttttcttt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C          C T
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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