The detailed information of tRNA gene sequence


Sequence ID>WENV170360926
Genome IDCETL01161175
Search identical group
Phylum/Class[CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 512
End posion on genome 426
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTATGGCGCACGCTTGGAAAGCGTGTAGAACGAAAGTTCAC
CGCAGGTTCGAATCCTGTCCTCTCCGCac
Downstream region at tRNA end position 
aaaaattcat
Secondary structure (Cloverleaf model)
>WENV170360926	Ser	GGA
                   a      GCac aaaaattcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G       + | | |                 T T
    C       T G G C
      T T A        G     TAGAACGAAAGTTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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