The detailed information of tRNA gene sequence


Sequence ID>WENV170361686
Genome IDCETM01022599
Search identical group
Phylum/Class[CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 26029
End posion on genome 26105
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaggagatac
tRNA gene sequence 
GGCCCCGTAGTGTAGCGGTCTAACACGCCACCCTGTCACGGTGGAGATCGTCGGTTCGAA
TCCGATCGGGGTCGCCA
Downstream region at tRNA end position 
ttcgagtttt
Secondary structure (Cloverleaf model)
>WENV170361686	Asp	GTC
                   c      GCCA ttcgagtttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      + | | | |     G
    G       T G T G       G T C G G     C
    G       | | | |                 T T
    T       A C A C
      C T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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