The detailed information of tRNA gene sequence


Sequence ID>WENV170362566
Genome IDCETM01081442
Search identical group
Phylum/Class[CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1349
End posion on genome 1441
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatttttaat
tRNA gene sequence 
GGAGGCGTGGGAGAGTTGGTTTAATCCAGCAGTTTGCTAAATTGCCGTGCGGTTAATTCC
GTACCGTTGGTTCGAATCCAACCGCCTCCGCCA
Downstream region at tRNA end position 
tttcatttaa
Secondary structure (Cloverleaf model)
>WENV170362566	Ser	GCT
                   t      GCCA tttcatttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
    T T G A        G      | | | | |     G
  G         G A G G       G T T G G     C
  G           | | |                 T T
  T         A T C C
    T T A          A     CGTGCGGTTAATTCCGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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