The detailed information of tRNA gene sequence


Sequence ID>WENV170362673
Genome IDCETM01091195
Search identical group
Phylum/Class[CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 229
End posion on genome 154
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cctattcttt
tRNA gene sequence 
GGGCGCGTAACTCAATTGGTAGAGTGCCACCCTTACAAGGTGGAAGTTACAGGTTCAAGT
CCTGTCGTGCCCACCA
Downstream region at tRNA end position 
ctctaaaccc
Secondary structure (Cloverleaf model)
>WENV170362673	Val	TAC
                   t      ACCA ctctaaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      | | | | |     A
    T       C T C A       A C A G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTT
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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