The detailed information of tRNA gene sequence


Sequence ID>WENV170363425
Genome IDCETM01158864
Search identical group
Phylum/Class[CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 139
End posion on genome 228
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgggttcc
tRNA gene sequence 
GGAGGGATGCGAGAGCGGACGATTCGGCACGCCTGGAACGCGTGTGTGGCTTTACGGTCA
CCGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
aaggccgact
Secondary structure (Cloverleaf model)
>WENV170363425	Ser	GGA
                   c      GCCG aaggccgact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G       + | | |                 T T
    A       T T C G
      C G A        G     TGTGGCTTTACGGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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