The detailed information of tRNA gene sequence


Sequence ID>WENV170364295
Genome IDCETM01204784
Search identical group
Phylum/Class[CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 14283
End posion on genome 14207
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccaaactat
tRNA gene sequence 
GCTCCTGTAGTTTAACATGGTTAAAACCACCGACTCATAATCGGTTGTTCTAAGTTCGAG
CCTTAGTGGGAGTACCA
Downstream region at tRNA end position 
atttttatta
Secondary structure (Cloverleaf model)
>WENV170364295	Met	CAT
                   t      ACCA atttttatta
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G + T          C G
                    T     G A T T C     A
    A C A A        A      | | | | |     G
  T         T T T G       C T A A G     C
  G         | | | |                 T T
  G         A A A C
    T T A          C     TGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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