The detailed information of tRNA gene sequence


Sequence ID>WENV170370232
Genome IDCETR01078119
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 63
End posion on genome 139
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttacaacga
tRNA gene sequence 
GGCGCATTCGTCTGGAGGTCAAGGACACCGTTCTCTCAGGATGGAGATCACGGGTTCAAA
TCCCCTATGCGCTTCCA
Downstream region at tRNA end position 
gaagccaggc
Secondary structure (Cloverleaf model)
>WENV170370232	Glu	CTC
                   a      TCCA gaagccaggc
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T C C C C     A
      A G G        C      |   | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A A        A     AGATC
                    C - G
                    C - G
                    G + T
                    T - A
                    T + G
                  C       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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