The detailed information of tRNA gene sequence


Sequence ID>WENV170370827
Genome IDCETR01155494
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 163
End posion on genome 89
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaattaaaaA
tRNA gene sequence 
GGCACAAGACCAAAGCAGGTAATTGGAGGAATCTGCAAAATTTCTTATACTGGTTCGAAT
CCAGTTTGTGCTTGtt
Downstream region at tRNA end position 
attatgataa
Secondary structure (Cloverleaf model)
>WENV170370827	Cys	GCA
                   A      TGtt attatgataa
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T
                     A - T          T A
                    G     T G A C C     A
      C G A        A      | | | | |     G
    A       A A C C       A C T G G     C
    G       | | | |                 T T
    G       T T G G
      T A A        A     TTAT
                    G - C
                    G + T
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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