The detailed information of tRNA gene sequence


Sequence ID>WENV170370890
Genome IDCETR01180493
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 158
End posion on genome 83
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gatggaaaac
tRNA gene sequence 
GCCGACATAGCTCAGTTGGTAGAGCAGGGGTTTTGTAAACCTCAGGTCCGGGGTTCGAGT
CCTCGTGTCGGCACCA
Downstream region at tRNA end position 
ccttttttct
Secondary structure (Cloverleaf model)
>WENV170370890	Thr	TGT
                   c      ACCA ccttttttct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T G
                    T     G C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    G + T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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