The detailed information of tRNA gene sequence


Sequence ID>WENV170370899
Genome IDCETR01184536
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 107
End posion on genome 196
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagtttaaa
tRNA gene sequence 
GGAGAGTTGGCAGAGTAGGTCTATCGCGCTCGACTGCTAATCGAGAGTCCCGAAAGGGGC
GCACAGGTTCGAATCCTGTACTCTCCGCCA
Downstream region at tRNA end position 
aatactagag
Secondary structure (Cloverleaf model)
>WENV170370899	Ser	GCT
                   a      GCCA aatactagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
    A T G A        G      | | | | |     G
  G         G A C G       A C A G G     C
  G         +   | |                 T T
  T         T C G C
    C T A          G     AGTCCCGAAAGGGGCGC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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