The detailed information of tRNA gene sequence


Sequence ID>WENV170371012
Genome IDCETR01222184
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 34
End posion on genome 130
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attcatttaa
tRNA gene sequence 
GGAGGCGAAAAGGGTCTGGTGATTCTCCTGGTCTTCAAAACCTGTGCATCGCGATTTTGT
CGGGATGGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
tgctgtgtaa
Secondary structure (Cloverleaf model)
>WENV170371012	SeC(p)	TCA
                   a      GCCA tgctgtgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A C C C     A
      T C T        A      | | | | |     G
    G       G G G A       G T G G G     C
    G       + + | |                 T T
    T       T T C T
      G A          C     TGCATCGCGATTTTGTCGGGATGG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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