The detailed information of tRNA gene sequence


Sequence ID>WENV170371059
Genome IDCETR01233223
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 319
End posion on genome 225
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caatttttat
tRNA gene sequence 
AGCGGGATGGCAGAGCGGCTTAATGCAGCTGTTTCGAAAGCAGTCGGTCTGAGATGAAAG
CAGGCCCGAGGGTTCGAATCCCTCTCCCGCTGCCA
Downstream region at tRNA end position 
attggagtat
Secondary structure (Cloverleaf model)
>WENV170371059	Ser	CGA
                   t      GCCA attggagtat
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    C       A T G C
      T T A        A     CGGTCTGAGATGAAAGCAGGCCC
                    G + T
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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