The detailed information of tRNA gene sequence


Sequence ID>WENV170371260
Genome IDCETR01268470
Search identical group
Phylum/Class[CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5787
End posion on genome 5862
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaataagac
tRNA gene sequence 
GGGGCTATCGTCTAGTTTGGTCCAGGATGTTAGCTTTGGGAGCTAATGGTCGTGGGTTCA
AATCCCACTAGCCCCAttt
Downstream region at tRNA end position 
aatgtttttn
Secondary structure (Cloverleaf model)
>WENV170371260	Pro	TGG
                   c      Attt aatgtttttn
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     A
  T         T C T G       G T G G G     C
  G         + | | +                 T T
  G         G G A T
    T C C A        G     TGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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