The detailed information of tRNA gene sequence


Sequence ID>WENV170371909
Genome IDCETS01049141
Search identical group
Phylum/Class[CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 693
End posion on genome 601
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAAGAGTGGGTGAGATGGCTGAAACCAATCGGTTGCTAACTGATCTTACGGAGAAATTC
GTAACGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
ttaataaagc
Secondary structure (Cloverleaf model)
>WENV170371909	Ser	GCT
                   n      GCCA ttaataaagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    T A G A        G      | | | | |     G
  G         G T G G       G T G G G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CTTACGGAGAAATTCGTAAC
                    A - T
                    T - A
                    C - G
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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