The detailed information of tRNA gene sequence


Sequence ID>WENV170372594
Genome IDCETS01113814
Search identical group
Phylum/Class[CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 292
End posion on genome 208
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatcactgt
tRNA gene sequence 
GCGGGGATCGCCTAGCTTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCtg
Downstream region at tRNA end position 
aattaaactt
Secondary structure (Cloverleaf model)
>WENV170372594	Ser	GCT
                   t      GCtg aattaaactt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    T       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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