The detailed information of tRNA gene sequence


Sequence ID>WENV170373322
Genome IDCETS01249935
Search identical group
Phylum/Class[CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 555
End posion on genome 466
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaatcgtt
tRNA gene sequence 
GGAGAGTTGGGTGAGTGGTTGAAACCAAGGCACTGCTAGCGCCTCGAAGGAGAAATCCTT
CCGTGAGTTCGAATCTCACACTCTCCGCCA
Downstream region at tRNA end position 
taattatcta
Secondary structure (Cloverleaf model)
>WENV170373322	Ser	GCT
                   t      GCCA taattatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G T G A G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGAAGGAGAAATCCTTCC
                    A - T
                    G - C
                    G - C
                    C - G
                    A   C
                  C       G
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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