The detailed information of tRNA gene sequence


Sequence ID>WENV170373538
Genome IDCETT01001306
Search identical group
Phylum/Class[CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 617
End posion on genome 542
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccctgtttct
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGACTGGCAGTCAAGAGGTCGTCGGTTCGATC
CCGTCCGGCTCCACAA
Downstream region at tRNA end position 
tttattgttt
Secondary structure (Cloverleaf model)
>WENV170373538	Ala	GGC
                   t      ACAA tttattgttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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